https://gydb.org/index.php?action=history&feed=atom&title=Element%3AB1147A04.5 2026-06-09T17:29:55Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:B1147A04.5&diff=324&oldid=prev 2009-11-10T18:29:23Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=19386808 AP003735.4 (nuc; 24.705-46.912)]<br /> |type=Tat<br /> |genus=Athila/Tat<br /> |subfamily=Branch 2<br /> |family=Ty3/Gypsy<br /> |group=LTR retroelements<br /> |description=B1147A04.5 is a giant ''Ty3/Gypsy'' LTR retrotransposon characterized by sequencing data in ''Oryza sativa'' ([[Literature:85385|Sasaki et al. 2002]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of other lineage of putative plant endogenous retroviruses (''Athila''), providing evidence of a shared ancestral lineage originally described as class A by Wright and Voytas ([[Literature:83586|1998]]). The genomic structure of B1147A04.5 is 22.2 Kb in size including LTRs of 1 Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA&lt;sup&gt;Arg&lt;/sup&gt;, Open Reading Frames (ORFs) for ''gag'', and ''pol'' genes, and a Polypurine Tract (PPT) adjacent to the 3&amp;prime;LTR (''pol'' gene displays several stop codons, indicating that this clone is probably not functional).<br /> |structure=B1147a04.5.png<br /> |host=Oryza sativa<br /> |hostpic=Oryza_sativa.gif<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://www.biotechvana.com Image, Carlos Llorens, &lt;br&gt;Copyright, GyDB, Biotech Vana]<br /> }}</div>

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