https://gydb.org/index.php?action=history&feed=atom&title=Element%3ACer6 2026-06-09T14:56:20Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:Cer6&diff=339&oldid=prev 2010-01-19T16:40:00Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=558368 Z38112 (nuc 5690-591)]<br /> |type=B-clade<br /> |genus=Mag<br /> |subfamily=Branch 2<br /> |family=Ty3/Gypsy<br /> |group=LTR retroelements<br /> |description=''Cer6'' is a LTR retrotransposon described from sequencing data in the chromosome III of ''C. elegans'' ([[Literature:8238|Bowen and McDonald 1999]]). ''Cer6'' belongs, along with other LTR retrotransposons, to ''Mag'' a large ''Ty3/Gypsy'' cluster widely distributed in both protostomes and deuterostomes (for more details, see [[Literature:46552|Malik and Eickbush 1999]]; [[Literature:80624|Volff et al. 2001]]; [[Literature:78091|Tubio, Naveira and Costas 2004]]). The genomic structure of ''Cer6'' is 5.1 Kb in size including LTRs of 218 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA&lt;sup&gt;Ser&lt;/sup&gt;, a single Open Reading Frame (ORF) ''gag-pol'' displaying two frameshiftings (first, in the protease domain, and second, between the RNAseH and Integrase domains), and a Polypurine Tract (PPT) adjacent to the 3&amp;acute;LTR ([[Literature:8238|Bowen and McDonald 1999]];[[Literature:24311| Ganko, Fielman and McDonald 2001]]).<br /> |structure=Cer6.png<br /> |host=Caenorhabditis elegans<br /> |hostpic=Caenorhabditis_elegans.gif<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://www.eb.tuebingen.mpg.de/departments/4-evolutionary-biology Image, courtesy of Ralf J. Sommer, Max Planck Institute for Developmental Biology]<br /> }}</div>

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