https://gydb.org/index.php?action=history&feed=atom&title=Element%3AGalEa1 2026-06-09T16:15:00Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:GalEa1&diff=619&oldid=prev 2010-03-11T09:23:31Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=156600407 156600407]<br /> |type= GalEA<br /> |genus=Undetermined<br /> |subfamily=Branch 1<br /> |family= Ty1/Copia<br /> |group= LTR retroelements<br /> |description=''GalEa1'', characterized in the genome of the squat lobster (''Eumunida annulosa''), represents the first ''Ty1/Copia''-like LTR retrotransposon described in Crustacea ([[Literature:98385|Terrat ''et al.'' 2008]]). It belongs to ''GalEA'' clade a ''Ty1/Copia'' lineage specifically found in marin animals ([[Literature:98385|Terrat ''et al.'' 2008]]). <br /> <br /> The genome of ''GalEa1'' is 4669 bp in size, including LTRs of 124 bp long. The LTRs bounded internal region contains a Primer Binding Site (PBS) complementary to a tRNA&lt;sup&gt;Met&lt;/sup&gt;, a single large Open Reading Frame (ORF) (which harbors a stop codon at position 1.516 and a frameshift at position 1.979) and a Polypurine Tract (PPT) adjacent to its 3’LTR. The translated region displays the typical gag and pol polyprotein domains of ''Ty1/Copia'' LTR retrotransposons: gag, protease, integrase, reverse transcriptase and ribonuclease H ([[Literature:98385|Terrat ''et al.'' 2008]]).<br /> |structure=GalEa1.png<br /> |host=Eumunida spp<br /> |hostpic=Eumunida_spp.jpg<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://www.biolib.cz/en/image/id34567/ Cortesy of the Biological library (BioLib), Dr.Tamara Frank author]<br /> }}<br /> [[Category:Element]]</div>

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