https://gydb.org/index.php?action=history&feed=atom&title=Element%3AOryco1-1 2026-06-09T18:34:48Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:Oryco1-1&diff=570&oldid=prev 2010-01-19T15:31:36Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=41223814 41223814 (nuc 12146-17072)]<br /> |type= Oryco<br /> |genus=Undetermined<br /> |subfamily=Branch 2<br /> |family= Ty1/Copia<br /> |group= LTR retroelements<br /> |description=''Oryco1-1'' (''Oryco'' ''Copia'' element type 1-1) is a ''Ty1/Copia''-like LTR retrotransposon found in the genome of the rice (''Oryza sativa'' ssp. ''japonica'') ([[Literature:100596|Llorens ''et al''. 2009]]). It belongs and gives the name to ''Oryco'' clade within Branch 2 of the ''Ty1/Copia'' family ([[Literature:100596|Llorens ''et al''. 2009]]). The genome of ''Oryco1-1'' is 4927 bp in size, including a 364-bp 5’LTR and a 366-bp 3’LTR. The LTRs flank an internal region containing two overlapping Open Reading Frames (ORFs) that display the typical ''gag'' and ''pol'' domains organization of ''Ty1/Copia'' LTR retrotransposons (gag, protease, integrase, reverse transcriptase and ribonuclease H). <br /> |structure=oryco1-1.png<br /> |host=Oryza sativa<br /> |hostpic=Oryza_sativa.gif<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://www.biotechvana.com Image, Carlos Llorens, &lt;br&gt;Copyright, GyDB, Biotech Vana]<br /> }}<br /> [[Category:Element]]</div>

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