https://gydb.org/index.php?action=history&feed=atom&title=Element%3ARetroSor1 2026-06-09T22:38:33Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:RetroSor1&diff=405&oldid=prev 2009-11-10T18:27:55Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=4378065 AF098806]<br /> |type=Tat<br /> |genus=Athila/Tat<br /> |subfamily=Branch 2<br /> |family=Ty3/Gypsy<br /> |group=LTR retroelements<br /> |description=''RetroSor1'' is a LTR retrotransposon described from sequencing data in ''Sorghum bicolor'' ([[Literature:85490|Llaca et al. 1998]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of other lineage of putative plant endogenous retroviruses (''Athila''), providing evidence of a shared ancestral lineage originally described as class A by Wright and Voytas ([[Literature:83586|1998]]). The genomic structure of ''RetroSor1'' is 13.4 Kb in size including LTRs of 0.7 Kb. The internal region displays a Primer Binding Site (PBS) complementary to a tRNA&lt;sup&gt;Lys&lt;/sup&gt;, a single Open Reading Frame (ORF) coding for a gag-pol polyprotein, a untranslated (UTR) region downstream to the integrase domain of approximately 6.4 Kb in size, and also, a Polypurine Tract (PPT) adjacent to the 3&amp;acute;LTR ([[Literature:85490|Llaca et al. 1998]]).<br /> |structure=Retrosor1.png<br /> |host=Sorghum bicolor<br /> |hostpic=Sorghum_bicolor.gif<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://www.jardin-mundani.com/ Image, courtesy of Juan Bibiloni, Jardin Botanico Mundani]<br /> }}</div>

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