https://gydb.org/index.php?action=history&feed=atom&title=Element%3AVitico1-2 2026-06-09T18:42:33Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:Vitico1-2&diff=568&oldid=prev 2010-01-15T10:25:54Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=147783960 147783960]<br /> |type=Retrofit<br /> |genus=Undetermined<br /> |subfamily=Branch 2<br /> |family= Ty1/Copia<br /> |group= LTR retroelements<br /> |description=''Vitico1-2'' is a LTR retrotransposon found in the genome of ''Vitis vinifera'' ([[Literature:100596|Llorens ''et al''. 2009]]). This element belongs to ''Retrofit'' clade within Branch 2 of the ''Ty1/Copia'' family ([[Literature:100596|Llorens ''et al''. 2009]]). The genome of ''Vitico1-2'' is 4752 bp in size, including LTRs of 299 (5’LTR) and 295 nts long (3’LTR). The complete sequence of this element corresponds to the ''Vitis vinifera'' genome region included between the nucleotides 1075 and 5826 (GenBank accession: [http://www.ncbi.nlm.nih.gov/nuccore/AM462010 147783960]). LTRs flank a coding region displaying both ''Ty1/Copia''-like gag-pol polyproteins domains. Due to the presence of several stop codons and frameshiftings the sequence analyzed has been obtained by the assembly of adjacent polyprotein regions (GenBank accession: [http://www.ncbi.nlm.nih.gov/nuccore/147783960?itemid=3&amp;report=gbwithparts AM462010.2]).<br /> |structure=vitico1-2.png<br /> |host=Vitis vinifera<br /> |hostpic=Vitis_vinifera.jpg<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://commons.wikimedia.org/wiki/File:Vitis_vinifera.jpg Wikimedia, courtesy of &quot;Bangin&quot;]<br /> }}<br /> [[Category:Element]]</div>

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