https://gydb.org/index.php?action=history&feed=atom&title=Element%3AZeco1 2026-06-09T22:39:39Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Element:Zeco1&diff=620&oldid=prev 2010-01-27T16:27:51Z

<p></p> <p><b>New page</b></p><div>{{Element<br /> |genbank=[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&amp;val=154726955 154726955]<br /> |type= GalEA<br /> |genus=Undetermined<br /> |subfamily=Branch 1<br /> |family= Ty1/Copia<br /> |group= LTR retroelements<br /> |description=''Zeco1'', a ''Ty1/Copia''-like LTR retrotransposon, is associated to the family of ''GalEa''-like elements and has been described in the genome of the zebrafish (''Danio rerio'') ([[Literature:98385|Terrat ''et al.'' 2008]]). It belongs to ''GalEA'' clade a ''Ty1/Copia'' lineage specifically found in marin animals ([[Literature:98385|Terrat ''et al.'' 2008]]). <br /> <br /> The genome of ''Zeco1'' is 4.8 Kb in size (4807 bp long) including two identical 192-bp LTRs. It presents a LTRs flanked internal coding region disrupted by a frameshift and several stop codons but displaying the typical ''gag'' and ''pol'' domains associated to ''Ty1/Copia'' LTR retrotransposons. A Primer Binding Site (PBS) complementary to a tRNA&lt;sup&gt;Met&lt;/sup&gt; and a Polypurine Tract (PPT) are located respectively downstream and upstream to the 5’LTR and 3’LTR ([[Literature:98385|Terrat ''et al.'' 2008]]).<br /> |structure=Zeco1.png<br /> |host= Danio rerio<br /> |hostpic=Danio_rerio.jpg<br /> |literature=*[[Literature:15303|Mobile DNA II. (Craig et al. 2002)]]<br /> |picowner=[http://es.wikipedia.org/wiki/Archivo:Zebrafisch.jpg Image, courtesy of Wikipedia]<br /> }}<br /> [[Category:Element]]</div>

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