https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3AAP_Caulimoviridae_dom2Phylogeny:AP Caulimoviridae dom2 - Revision history2026-06-09T18:35:28ZRevision history for this page on the wikiMediaWiki 1.35.0https://gydb.org/index.php?title=Phylogeny:AP_Caulimoviridae_dom2&diff=1177&oldid=previmported>Gydbwiki at 15:24, 17 June 20102010-06-17T15:24:46Z<p></p>
<p><b>New page</b></p><div>[[Category:Phylogeny]]<br />
{{Phylogeny<br />
|map=<imagemap><br />
Image:AP_caulimoviridae_dom2.png|center<br />
rect 61 69 93 85 [[Element:PCSV|PCSV]]<br />
rect 61 98 94 114 [[Element:BRRV|BRRV]]<br />
rect 61 12 101 28 [[Element:CSVMV|CSVMV]]<br />
rect 61 40 101 56 [[Element:SbCMV|SbCMV]]<br />
</imagemap><br />
|method=<br />
Phylogenetic reconstruction inferred based on a second non-pol protease-like domain, encoded by the ORF VII of three soymoviruses and by the C-terminus of CSVMV-ORF I ''Cavemovirus'' (downstream to the MOV region), using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps. <br />
}}</div>imported>Gydbwiki