https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3ACHR_Ty1%2FCopia 2026-06-09T14:58:41Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:CHR_Ty1/Copia&diff=788&oldid=prev 2010-05-11T10:09:25Z

<p></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:CHR_ty1_copia.png|center<br /> rect 111 102 156 118 [[Element:CoDi4.3|CoDi4.3]]<br /> rect 111 132 156 148 [[Element:CoDi4.4|CoDi4.4]]<br /> rect 111 72 156 88 [[Element:CoDi4.1|CoDi4.1]]<br /> rect 111 42 156 58 [[Element:CoDi4.5|CoDi4.5]]<br /> rect 111 12 156 28 [[Element:CoDi3.1|CoDi3.1]]<br /> rect 111 162 158 178 [[Element:CoDi2.4|CoDi2.4]]<br /> rect 111 192 156 208 [[Element:CoDi7.1|CoDi7.1]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the chromo (CHR) domain region found in the encoded integrase protein C-terminus of the CoDi-I ''Ty1/Copia'' LTR retroelements. The phylogenetic tree has been performed using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

imported>Ldominguez