imported>Ldominguez at 10:41, 11 May 2010

2010-05-11T10:41:34Z

New page

[[Category:Phylogeny]]
{{Phylogeny
|map=<imagemap>
Image:CHR_all.png|center
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rect 362 113 387 129 [[Element:Tma|Tma]]
rect 362 73 410 89 [[Element:Peabody|Peabody]]
rect 362 53 381 69 [[Element:Del|Del]]
rect 362 32 420 48 [[Element:Retrosat-2|Retrosat-2]]
rect 362 12 400 28 [[Element:Bagy-1|Bagy-1]]
rect 362 134 391 150 [[Element:Gimli|Gimli]]
rect 362 154 395 170 [[Element:Reina|Reina]]
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rect 362 194 391 210 [[Element:Gloin|Gloin]]
rect 362 215 422 231 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=8778789 T32E20.30]
rect 362 235 403 251 [[Element:Monkey|Monkey]]
rect 362 296 387 312 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=15214050 hrp3]
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rect 362 397 444 413 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=19421557 HsCHDNABP5]
rect 362 417 419 433 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=543696 EF-3CVK2]
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rect 362 478 415 494 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7243213 KIAA1416]
rect 362 498 431 514 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=12621092 Beta-catenin]
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rect 362 539 416 555 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=2645435 DmCHD3]
rect 362 559 414 575 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7499938 F26F12.7]
rect 362 580 400 596 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=5921744 CHD-4]
rect 362 600 400 616 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=5921743 CHD-3]
rect 362 620 395 636 [[Element:REM1|REM1]]
rect 362 640 382 656 [[Element:Ifg7|Ifg7]]
rect 362 661 387 677 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=15214054 hrp1]
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rect 362 742 400 758 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=3182950 CHD-2]
rect 362 762 472 778 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7488929 polycomb-like/carrot]
rect 362 782 397 798 [[Element:Maggy|Maggy]]
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rect 362 823 418 839 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7496065 C15H11.5]
rect 362 843 388 859 [[Element:Real|Real]]
rect 362 863 394 879 [[Element:Pyggy|Pyggy]]
rect 362 904 447 920 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=38503415 H3-K9-HMTase]
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rect 362 985 398 1001 [[Element:Skippy|Skippy]]
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rect 362 1167 400 1183 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=13272199 ZMET5]
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rect 362 1208 394 1224 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=2766715 CMT1]
rect 362 1228 394 1244 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=15222449 CMT3]
rect 362 1289 410 1305 [[Element:Amn-ichi|Amn-ichi]]
rect 362 1309 412 1325 [[Element:Amn-san|Amn-san]]
rect 362 1269 398 1285 [[Element:marY1|marY1]]
rect 362 1330 417 1346 [[Element:Sushi-ichi|Sushi-ichi]]
rect 362 1350 401 1366 [[Element:Amn-ni|Amn-ni]]
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rect 362 1370 413 1386 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=20138088 TsCpYp2]
rect 362 1390 404 1406 [[Element:Skipper|Skipper]]
rect 362 1411 412 1427 [[Element:Galadriel|Galadriel]]
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rect 362 1471 397 1487 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=32172440 MSL-3]
rect 362 1492 431 1508 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=584704 A33_PLEWA]
rect 362 1552 398 1568 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=6919839 ALP13]
rect 362 1573 403 1589 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=59803121 MRG15]
rect 362 1532 406 1548 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=1710030 RBBP-1]
rect 362 1512 423 1528 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7509558 Y37D8A.11]
rect 362 1593 497 1609 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=15237745 histoneacetyltransferase]
rect 362 1613 442 1629 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7488914 ECp181-carrot]
rect 362 1634 387 1650 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=3024151 MOF]
rect 362 1654 392 1670 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=3023717 ESA1]
rect 362 1674 395 1690 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7508719 VC5.4]
rect 362 1715 402 1731 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7109239 PDDp3]
rect 362 1735 418 1751 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7496710 C29H12.5]
rect 362 1694 407 1710 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=1176603 T09A5.8]
rect 362 1755 396 1771 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=818888 CHRp]
rect 362 1775 410 1791 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7339838 Suv39h1]
rect 362 1796 391 1812 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=8648963 LdPh]
rect 362 1836 439 1852 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=730857 CHRassSWI6]
rect 362 1857 391 1873 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7493045 FYSp]
rect 362 1816 420 1832 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=19172978 CHRBOXp]
rect 362 1877 401 1893 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=20149951 L9MH3]
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rect 362 1917 402 1933 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=7505606 HP1Ce]
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rect 362 2079 428 2095 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=129718 POLYCOMB]
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rect 362 2221 407 2237 [[Element:CoDi4.5|CoDi4.5]]
rect 362 2181 407 2197 [[Element:CoDi4.3|CoDi4.3]]
rect 362 2161 407 2177 [[Element:CoDi4.4|CoDi4.4]]
rect 362 2140 407 2156 [[Element:CoDi3.1|CoDi3.1]]
rect 362 2120 407 2136 [[Element:CoDi2.4|CoDi2.4]]
rect 362 2100 435 2116 [[Element:Grasshopper|Grasshopper]]
rect 362 2242 404 2258 [[Element:Tntom1|Tntom1]]
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rect 362 2485 448 2501 [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=15217223 CSpolycombOs]
</imagemap>
|method=
Phylogenetic reconstruction inferred based on eukaryotic chromodomains using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.
}}

Phylogeny:CHR eukaryote protein domains - Revision history

imported>Ldominguez at 10:41, 11 May 2010