https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3ACHR_retroelement 2026-06-09T17:30:28Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:CHR_retroelement&diff=1220&oldid=prev 2010-05-11T10:10:53Z

<p></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:CHR_retroelement.png|center<br /> rect 101 47 127 63 [[Element:Real|Real]]<br /> rect 101 65 133 81 [[Element:Pyggy|Pyggy]]<br /> rect 101 29 174 45 [[Element:Grasshopper|Grasshopper]]<br /> rect 101 83 136 99 [[Element:Maggy|Maggy]]<br /> rect 101 101 142 117 [[Element:Dane-1|Dane-1]]<br /> rect 101 119 143 135 [[Element:Skipper|Skipper]]<br /> rect 101 137 142 153 [[Element:MGLR3|MGLR3]]<br /> rect 101 12 151 28 [[Element:G-Rhodo|G-Rhodo]]<br /> rect 101 155 156 171 [[Element:Sushi-ichi|Sushi-ichi]]<br /> rect 101 173 140 189 [[Element:Amn-ni|Amn-ni]]<br /> rect 101 191 137 207 [[Element:marY1|marY1]]<br /> rect 101 209 149 225 [[Element:Amn-ichi|Amn-ichi]]<br /> rect 101 227 151 243 [[Element:Amn-san|Amn-san]]<br /> rect 101 245 137 261 [[Element:Skippy|Skippy]]<br /> rect 101 263 142 279 [[Element:Monkey|Monkey]]<br /> rect 101 281 121 297 [[Element:Ifg7|Ifg7]]<br /> rect 101 299 134 315 [[Element:REM1|REM1]]<br /> rect 101 317 127 333 [[Element:Cft-1|Cft-1]]<br /> rect 101 335 128 351 [[Element:Pyret|Pyret]]<br /> rect 101 353 131 369 [[Element:Cgret|Cgret]]<br /> rect 101 425 146 441 [[Element:CoDi4.1|CoDi4.1]]<br /> rect 101 442 146 458 [[Element:CoDi4.5|CoDi4.5]]<br /> rect 101 407 146 423 [[Element:CoDi4.4|CoDi4.4]]<br /> rect 101 389 146 405 [[Element:CoDi4.3|CoDi4.3]]<br /> rect 101 371 146 387 [[Element:CoDi3.1|CoDi3.1]]<br /> rect 101 460 146 476 [[Element:CoDi7.1|CoDi7.1]]<br /> rect 101 478 146 494 [[Element:CoDi2.4|CoDi2.4]]<br /> rect 101 496 143 512 [[Element:Tntom1|Tntom1]]<br /> rect 101 550 130 566 [[Element:Gimli|Gimli]]<br /> rect 101 568 134 584 [[Element:Reina|Reina]]<br /> rect 101 532 130 548 [[Element:Gloin|Gloin]]<br /> rect 101 514 151 530 [[Element:Galadriel|Galadriel]]<br /> rect 101 586 159 602 [[Element:Retrosat-2|Retrosat-2]]<br /> rect 101 604 139 620 [[Element:Bagy-1|Bagy-1]]<br /> rect 101 622 120 638 [[Element:Del|Del]]<br /> rect 101 640 149 656 [[Element:Peabody|Peabody]]<br /> rect 101 658 146 674 [[Element:Legolas|Legolas]]<br /> rect 101 676 126 692 [[Element:Tma|Tma]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the chromo (CHR) domain region found in the encoded integrase protein C-terminus of the CoDi-I ''Ty1/Copia'' and ''Ty3/Gypsy'' LTR retroelements. The phylogenetic tree has been performed using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

imported>Ldominguez