https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3AGAGPOL_Ty3%2FGypsy 2026-06-09T16:16:09Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:GAGPOL_Ty3/Gypsy&diff=812&oldid=prev 2009-11-25T14:01:14Z

<p>moved <a href="/index.php?title=Phylogeny:GAGPOL_Ty3Gypsy" class="mw-redirect" title="Phylogeny:GAGPOL Ty3Gypsy">Phylogeny:GAGPOL Ty3Gypsy</a> to <a href="/index.php?title=Phylogeny:GAGPOL_Ty3/Gypsy" title="Phylogeny:GAGPOL Ty3/Gypsy">Phylogeny:GAGPOL Ty3/Gypsy</a></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:GAGPOL_ty3_gypsy.png|center<br /> rect 288 12 336 28 [[Element:Peabody|Peabody]]<br /> rect 288 31 307 47 [[Element:Del|Del]]<br /> rect 288 50 326 66 [[Element:Bagy-1|Bagy-1]]<br /> rect 288 69 346 85 [[Element:Retrosat-2|Retrosat-2]]<br /> rect 288 88 333 104 [[Element:Legolas|Legolas]]<br /> rect 288 108 313 124 [[Element:Tma|Tma]]<br /> rect 288 127 321 143 [[Element:Reina|Reina]]<br /> rect 288 146 317 162 [[Element:Gloin|Gloin]]<br /> rect 288 165 308 181 [[Element:Ifg7|Ifg7]]<br /> rect 288 184 317 200 [[Element:Gimli|Gimli]]<br /> rect 288 204 330 220 [[Element:Beetle1|Beetle1]]<br /> rect 288 223 329 239 [[Element:Cereba|Cereba]]<br /> rect 288 242 315 258 [[Element:CRM|CRM]]<br /> rect 288 319 321 335 [[Element:REM1|REM1]]<br /> rect 288 300 330 316 [[Element:Tntom1|Tntom1]]<br /> rect 288 281 338 297 [[Element:Galadriel|Galadriel]]<br /> rect 288 261 329 277 [[Element:Monkey|Monkey]]<br /> rect 288 338 338 354 [[Element:G-Rhodo|G-Rhodo]]<br /> rect 288 357 316 373 [[Element:Tse3|Tse3]]<br /> rect 288 377 309 393 [[Element:TF2|TF2]]<br /> rect 288 396 309 412 [[Element:TF1|TF1]]<br /> rect 288 454 320 470 [[Element:Pyggy|Pyggy]]<br /> rect 288 473 314 489 [[Element:Real|Real]]<br /> rect 288 434 361 450 [[Element:Grasshopper|Grasshopper]]<br /> rect 288 492 323 508 [[Element:Maggy|Maggy]]<br /> rect 288 511 329 527 [[Element:Dane-1|Dane-1]]<br /> rect 288 415 329 431 [[Element:MGLR3|MGLR3]]<br /> rect 288 569 318 585 [[Element:Cgret|Cgret]]<br /> rect 288 588 315 604 [[Element:Pyret|Pyret]]<br /> rect 288 550 324 566 [[Element:Skippy|Skippy]]<br /> rect 288 530 314 546 [[Element:Cft-1|Cft-1]]<br /> rect 288 607 324 623 [[Element:marY1|marY1]]<br /> rect 288 627 336 643 [[Element:Amn-ichi|Amn-ichi]]<br /> rect 288 646 338 662 [[Element:Amn-san|Amn-san]]<br /> rect 288 665 343 681 [[Element:Sushi-ichi|Sushi-ichi]]<br /> rect 288 684 327 700 [[Element:Amn-ni|Amn-ni]]<br /> rect 288 703 318 719 [[Element:Ty3-1|Ty3-1]]<br /> rect 288 723 330 739 [[Element:Skipper|Skipper]]<br /> rect 288 742 334 758 [[Element:Micropia|Micropia]]<br /> rect 288 761 340 777 [[Element:Blastopia|Blastopia]]<br /> rect 288 780 318 796 [[Element:Mdg3|Mdg3]]<br /> rect 288 1376 320 1392 [[Element:CFG1|CFG1]]<br /> rect 288 1395 315 1411 [[Element:DRM|DRM]]<br /> rect 288 1357 338 1373 [[Element:Hydra2-1|Hydra2-1]]<br /> rect 288 1338 313 1354 [[Element:SPM|SPM]]<br /> rect 288 1319 311 1335 [[Element:Mag|Mag]]<br /> rect 288 1415 329 1431 [[Element:Gulliver|Gulliver]]<br /> rect 288 1434 315 1450 [[Element:Cer4|Cer4]]<br /> rect 288 1453 315 1469 [[Element:Cer5|Cer5]]<br /> rect 288 1472 315 1488 [[Element:Cer6|Cer6]]<br /> rect 288 1299 321 1315 [[Element:SURL|SURL]]<br /> rect 288 1280 322 1296 [[Element:Cigr-1|Cigr-1]]<br /> rect 288 1261 313 1277 [[Element:Tor2|Tor2]]<br /> rect 288 1242 320 1258 [[Element:Tor4a|Tor4a]]<br /> rect 288 1222 313 1238 [[Element:Tor1|Tor1]]<br /> rect 288 1203 326 1219 [[Element:Kabuki|Kabuki]]<br /> rect 288 1184 329 1200 [[Element:CsRN1|CsRN1]]<br /> rect 288 1165 339 1181 [[Element:Boudicca|Boudicca]]<br /> rect 288 1126 315 1142 [[Element:Cer2|Cer2]]<br /> rect 288 1107 315 1123 [[Element:Cer3|Cer3]]<br /> rect 288 1146 315 1162 [[Element:Cer1|Cer1]]<br /> rect 288 1088 318 1104 [[Element:Mdg1|Mdg1]]<br /> rect 288 1069 309 1085 [[Element:412|412]]<br /> rect 288 819 309 835 [[Element:297|297]]<br /> rect 288 838 313 854 [[Element:Tom|Tom]]<br /> rect 288 800 312 816 [[Element:17.6|17.6]]<br /> rect 288 857 316 873 [[Element:Idefix|Idefix]]<br /> rect 288 876 307 892 [[Element:Tv1|Tv1]]<br /> rect 288 896 313 912 [[Element:Zam|Zam]]<br /> rect 288 915 309 931 [[Element:Ted|Ted]]<br /> rect 288 953 357 969 [[Element:HMS-Beagle|HMS-Beagle]]<br /> rect 288 973 314 989 [[Element:Yoyo|Yoyo]]<br /> rect 288 934 329 950 [[Element:Nomad|Nomad]]<br /> rect 288 992 333 1008 [[Element:Burdock|Burdock]]<br /> rect 288 1011 335 1027 [[Element:Springer|Springer]]<br /> rect 288 1030 321 1046 [[Element:Gypsy|Gypsy]]<br /> rect 288 1049 333 1065 [[Element:Gypsyvir|Gypsyvir]]<br /> rect 288 1837 323 1853 [[Element:rGmr1|rGmr1]]<br /> rect 288 1818 319 1834 [[Element:Gmr1|Gmr1]]<br /> rect 288 1799 333 1815 [[Element:Ulysses|Ulysses]]<br /> rect 288 1780 317 1796 [[Element:Circe|Circe]]<br /> rect 288 1761 333 1777 [[Element:Osvaldo|Osvaldo]]<br /> rect 288 1741 316 1757 [[Element:Woot|Woot]]<br /> rect 288 1703 333 1719 [[Element:Calypso|Calypso]]<br /> rect 288 1722 343 1738 [[Element:Cyclops-2|Cyclops-2]]<br /> rect 288 1684 336 1700 [[Element:Athila4-1|Athila4-1]]<br /> rect 288 1665 326 1681 [[Element:Bagy-2|Bagy-2]]<br /> rect 288 1645 339 1661 [[Element:Diaspora|Diaspora]]<br /> rect 288 1626 315 1642 [[Element:Ogre|Ogre]]<br /> rect 288 1607 323 1623 [[Element:Tat4-1|Tat4-1]]<br /> rect 288 1588 308 1604 [[Element:Tft2|Tft2]]<br /> rect 288 1568 331 1584 [[Element:Cinful-1|Cinful-1]]<br /> rect 288 1549 344 1565 [[Element:RetroSor1|RetroSor1]]<br /> rect 288 1530 347 1546 [[Element:Grande1-4|Grande1-4]]<br /> rect 288 1511 355 1527 [[Element:B1147A04.5|B1147A04.5]]<br /> rect 288 1492 324 1508 [[Element:RIRE2|RIRE2]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the gag and pol polyproteins encoded by the ''Ty3/Gypsy'' LTR retroelement family using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

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