https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3AGAG_Ty3%2FGypsy 2026-06-09T17:10:16Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:GAG_Ty3/Gypsy&diff=814&oldid=prev 2009-11-25T14:00:15Z

<p>moved <a href="/index.php?title=Phylogeny:GAG_Ty3Gypsy" class="mw-redirect" title="Phylogeny:GAG Ty3Gypsy">Phylogeny:GAG Ty3Gypsy</a> to <a href="/index.php?title=Phylogeny:GAG_Ty3/Gypsy" title="Phylogeny:GAG Ty3/Gypsy">Phylogeny:GAG Ty3/Gypsy</a></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:GAG_ty3_gypsy.png|center<br /> rect 309 138 344 154 [[Element:Maggy|Maggy]]<br /> rect 309 117 350 133 [[Element:Dane-1|Dane-1]]<br /> rect 309 160 382 176 [[Element:Grasshopper|Grasshopper]]<br /> rect 309 96 345 112 [[Element:marY1|marY1]]<br /> rect 309 75 357 91 [[Element:Amn-ichi|Amn-ichi]]<br /> rect 309 54 359 70 [[Element:Amn-san|Amn-san]]<br /> rect 309 33 364 49 [[Element:Sushi-ichi|Sushi-ichi]]<br /> rect 309 12 348 28 [[Element:Amn-ni|Amn-ni]]<br /> rect 309 181 341 197 [[Element:Pyggy|Pyggy]]<br /> rect 309 202 335 218 [[Element:Real|Real]]<br /> rect 309 223 350 239 [[Element:MGLR3|MGLR3]]<br /> rect 309 244 359 260 [[Element:G-Rhodo|G-Rhodo]]<br /> rect 309 265 342 281 [[Element:REM1|REM1]]<br /> rect 309 329 359 345 [[Element:Galadriel|Galadriel]]<br /> rect 309 308 350 324 [[Element:Monkey|Monkey]]<br /> rect 309 286 351 302 [[Element:Tntom1|Tntom1]]<br /> rect 309 350 334 366 [[Element:Tor1|Tor1]]<br /> rect 309 371 335 387 [[Element:Cft-1|Cft-1]]<br /> rect 309 392 345 408 [[Element:Skippy|Skippy]]<br /> rect 309 413 339 429 [[Element:Cgret|Cgret]]<br /> rect 309 434 336 450 [[Element:Pyret|Pyret]]<br /> rect 309 498 338 514 [[Element:Gloin|Gloin]]<br /> rect 309 519 329 535 [[Element:Ifg7|Ifg7]]<br /> rect 309 477 338 493 [[Element:Gimli|Gimli]]<br /> rect 309 456 342 472 [[Element:Reina|Reina]]<br /> rect 309 582 350 598 [[Element:Cereba|Cereba]]<br /> rect 309 604 336 620 [[Element:CRM|CRM]]<br /> rect 309 561 373 577 [[Element:Cereba|Cereba]]<br /> rect 309 540 351 556 [[Element:Beetle1|Beetle1]]<br /> rect 309 646 354 662 [[Element:Legolas|Legolas]]<br /> rect 309 667 334 683 [[Element:Tma|Tma]]<br /> rect 309 625 357 641 [[Element:Peabody|Peabody]]<br /> rect 309 688 347 704 [[Element:Bagy-1|Bagy-1]]<br /> rect 309 709 367 725 [[Element:Retrosat-2|Retrosat-2]]<br /> rect 309 730 328 746 [[Element:Del|Del]]<br /> rect 309 752 337 768 [[Element:Tse3|Tse3]]<br /> rect 309 773 339 789 [[Element:Ty3-1|Ty3-1]]<br /> rect 309 794 351 810 [[Element:Skipper|Skipper]]<br /> rect 309 857 360 873 [[Element:Diaspora|Diaspora]]<br /> rect 309 878 357 894 [[Element:Athila4-1|Athila4-1]]<br /> rect 309 836 364 852 [[Element:Cyclops-2|Cyclops-2]]<br /> rect 309 815 347 831 [[Element:Bagy-2|Bagy-2]]<br /> rect 309 900 372 916 [[Element:Calypso|Calypso]]<br /> rect 309 921 336 937 [[Element:Ogre|Ogre]]<br /> rect 309 942 365 958 [[Element:RetroSor1|RetroSor1]]<br /> rect 309 963 344 979 [[Element:Tat4-1|Tat4-1]]<br /> rect 309 984 329 1000 [[Element:Tft2|Tft2]]<br /> rect 309 1005 345 1021 [[Element:RIRE2|RIRE2]]<br /> rect 309 1026 368 1042 [[Element:Grande1-4|Grande1-4]]<br /> rect 309 1048 376 1064 [[Element:B1147A04.5|B1147A04.5]]<br /> rect 309 1470 354 1486 [[Element:Osvaldo|Osvaldo]]<br /> rect 309 1449 337 1465 [[Element:Woot|Woot]]<br /> rect 309 1492 354 1508 [[Element:Ulysses|Ulysses]]<br /> rect 309 1513 338 1529 [[Element:Circe|Circe]]<br /> rect 309 1534 344 1550 [[Element:rGmr1|rGmr1]]<br /> rect 309 1555 340 1571 [[Element:Gmr1|Gmr1]]<br /> rect 309 1386 361 1402 [[Element:Blastopia|Blastopia]]<br /> rect 309 1365 339 1381 [[Element:Mdg3|Mdg3]]<br /> rect 309 1407 355 1423 [[Element:Micropia|Micropia]]<br /> rect 309 1428 341 1444 [[Element:Tor4a|Tor4a]]<br /> rect 309 1344 336 1360 [[Element:Cer2|Cer2]]<br /> rect 309 1322 336 1338 [[Element:Cer3|Cer3]]<br /> rect 309 1090 336 1106 [[Element:Cer5|Cer5]]<br /> rect 309 1111 336 1127 [[Element:Cer6|Cer6]]<br /> rect 309 1069 336 1085 [[Element:Cer4|Cer4]]<br /> rect 309 1132 350 1148 [[Element:Gulliver|Gulliver]]<br /> rect 309 1153 336 1169 [[Element:Cer1|Cer1]]<br /> rect 309 1174 342 1190 [[Element:SURL|SURL]]<br /> rect 309 1301 343 1317 [[Element:Cigr-1|Cigr-1]]<br /> rect 309 1196 332 1212 [[Element:Mag|Mag]]<br /> rect 309 1217 334 1233 [[Element:SPM|SPM]]<br /> rect 309 1238 336 1254 [[Element:DRM|DRM]]<br /> rect 309 1259 341 1275 [[Element:CFG1|CFG1]]<br /> rect 309 1280 359 1296 [[Element:Hydra2-1|Hydra2-1]]<br /> rect 309 1576 330 1592 [[Element:TF2|TF2]]<br /> rect 309 1597 330 1613 [[Element:TF1|TF1]]<br /> rect 309 1618 360 1634 [[Element:Boudicca|Boudicca]]<br /> rect 309 1640 350 1656 [[Element:CsRN1|CsRN1]]<br /> rect 309 1661 347 1677 [[Element:Kabuki|Kabuki]]<br /> rect 309 1682 334 1698 [[Element:Tor2|Tor2]]<br /> rect 309 1788 330 1804 [[Element:297|297]]<br /> rect 309 1809 334 1825 [[Element:Tom|Tom]]<br /> rect 309 1766 333 1782 [[Element:17.6|17.6]]<br /> rect 309 1745 328 1761 [[Element:Tv1|Tv1]]<br /> rect 309 1724 337 1740 [[Element:Idefix|Idefix]]<br /> rect 309 1703 330 1719 [[Element:Ted|Ted]]<br /> rect 309 2020 339 2036 [[Element:Mdg1|Mdg1]]<br /> rect 309 1999 330 2015 [[Element:412|412]]<br /> rect 309 1978 342 1994 [[Element:Gypsy|Gypsy]]<br /> rect 309 1957 354 1973 [[Element:Gypsyvir|Gypsyvir]]<br /> rect 309 1936 354 1952 [[Element:Burdock|Burdock]]<br /> rect 309 1914 356 1930 [[Element:Springer|Springer]]<br /> rect 309 1830 334 1846 [[Element:Zam|Zam]]<br /> rect 309 1851 350 1867 [[Element:Nomad|Nomad]]<br /> rect 309 1872 378 1888 [[Element:HMS-Beagle|HMS-Beagle]]<br /> rect 309 1893 335 1909 [[Element:Yoyo|Yoyo]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the gag polyprotein encoded by the ''Ty3/Gypsy'' LTR retroelement family using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps. <br /> }}</div>

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