https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3AINT_Ty3%2FGypsy 2026-06-09T16:06:44Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:INT_Ty3/Gypsy&diff=822&oldid=prev 2010-04-28T07:30:42Z

<p></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:INT_ty3_gypsy.png|center<br /> rect 345 463 418 479 [[Element:Grasshopper|Grasshopper]]<br /> rect 345 447 386 463 [[Element:MGLR3|MGLR3]]<br /> rect 345 432 381 448 [[Element:marY1|marY1]]<br /> rect 345 416 386 432 [[Element:Dane-1|Dane-1]]<br /> rect 345 401 380 417 [[Element:Maggy|Maggy]]<br /> rect 345 385 371 401 [[Element:Cft-1|Cft-1]]<br /> rect 345 370 381 386 [[Element:Skippy|Skippy]]<br /> rect 345 338 372 354 [[Element:Pyret|Pyret]]<br /> rect 345 354 375 370 [[Element:Cgret|Cgret]]<br /> rect 345 307 395 323 [[Element:Amn-san|Amn-san]]<br /> rect 345 323 393 339 [[Element:Amn-ichi|Amn-ichi]]<br /> rect 345 292 400 308 [[Element:Sushi-ichi|Sushi-ichi]]<br /> rect 345 276 384 292 [[Element:Amn-ni|Amn-ni]]<br /> rect 345 261 390 277 [[Element:Legolas|Legolas]]<br /> rect 345 245 370 261 [[Element:Tma|Tma]]<br /> rect 345 229 393 245 [[Element:Peabody|Peabody]]<br /> rect 345 214 364 230 [[Element:Del|Del]]<br /> rect 345 198 383 214 [[Element:Bagy-1|Bagy-1]]<br /> rect 345 28 365 44 [[Element:Ifg7|Ifg7]]<br /> rect 345 44 374 60 [[Element:Gloin|Gloin]]<br /> rect 345 13 374 29 [[Element:Gimli|Gimli]]<br /> rect 345 75 387 91 [[Element:Tntom1|Tntom1]]<br /> rect 345 59 378 75 [[Element:Reina|Reina]]<br /> rect 345 90 386 106 [[Element:Monkey|Monkey]]<br /> rect 345 106 395 122 [[Element:Galadriel|Galadriel]]<br /> rect 345 168 375 184 [[Element:Ty3-1|Ty3-1]]<br /> rect 345 153 387 169 [[Element:Beetle1|Beetle1]]<br /> rect 345 137 386 153 [[Element:Cereba|Cereba]]<br /> rect 345 121 372 137 [[Element:CRM|CRM]]<br /> rect 345 184 403 200 [[Element:Retrosat-2|Retrosat-2]]<br /> rect 345 992 383 1008 [[Element:Kabuki|Kabuki]]<br /> rect 345 977 396 993 [[Element:Boudicca|Boudicca]]<br /> rect 345 961 386 977 [[Element:CsRN1|CsRN1]]<br /> rect 345 946 372 962 [[Element:Cer3|Cer3]]<br /> rect 345 930 372 946 [[Element:Cer2|Cer2]]<br /> rect 345 915 372 931 [[Element:Cer1|Cer1]]<br /> rect 345 899 366 915 [[Element:412|412]]<br /> rect 345 883 375 899 [[Element:Mdg1|Mdg1]]<br /> rect 345 868 370 884 [[Element:Tor2|Tor2]]<br /> rect 346 477 372 493 [[Element:Real|Real]]<br /> rect 346 492 378 508 [[Element:Pyggy|Pyggy]]<br /> rect 346 554 374 570 [[Element:Tse3|Tse3]]<br /> rect 346 665 391 681 [[Element:Ulysses|Ulysses]]<br /> rect 346 539 388 555 [[Element:Skipper|Skipper]]<br /> rect 346 523 367 539 [[Element:TF2|TF2]]<br /> rect 346 508 367 524 [[Element:TF1|TF1]]<br /> rect 346 570 379 586 [[Element:REM1|REM1]]<br /> rect 346 586 396 602 [[Element:G-Rhodo|G-Rhodo]]<br /> rect 346 601 377 617 [[Element:Gmr1|Gmr1]]<br /> rect 346 617 381 633 [[Element:rGmr1|rGmr1]]<br /> rect 346 632 374 648 [[Element:Woot|Woot]]<br /> rect 346 648 391 664 [[Element:Osvaldo|Osvaldo]]<br /> rect 346 679 375 695 [[Element:Circe|Circe]]<br /> rect 346 695 380 711 [[Element:Cigr-1|Cigr-1]]<br /> rect 346 710 379 726 [[Element:SURL|SURL]]<br /> rect 346 741 373 757 [[Element:Cer5|Cer5]]<br /> rect 346 757 373 773 [[Element:Cer6|Cer6]]<br /> rect 346 726 373 742 [[Element:Cer4|Cer4]]<br /> rect 346 850 369 866 [[Element:Mag|Mag]]<br /> rect 346 772 387 788 [[Element:Gulliver|Gulliver]]<br /> rect 346 835 371 851 [[Element:SPM|SPM]]<br /> rect 346 819 396 835 [[Element:Hydra2-1|Hydra2-1]]<br /> rect 346 804 373 820 [[Element:DRM|DRM]]<br /> rect 346 788 378 804 [[Element:CFG1|CFG1]]<br /> rect 347 1491 380 1507 [[Element:Gypsy|Gypsy]]<br /> rect 347 1444 392 1460 [[Element:Burdock|Burdock]]<br /> rect 347 1475 392 1491 [[Element:Gypsyvir|Gypsyvir]]<br /> rect 347 1459 394 1475 [[Element:Springer|Springer]]<br /> rect 347 1428 373 1444 [[Element:Yoyo|Yoyo]]<br /> rect 347 1413 416 1429 [[Element:HMS-Beagle|HMS-Beagle]]<br /> rect 347 1397 388 1413 [[Element:Nomad|Nomad]]<br /> rect 347 1382 372 1398 [[Element:Zam|Zam]]<br /> rect 347 1350 375 1366 [[Element:Idefix|Idefix]]<br /> rect 347 1366 368 1382 [[Element:Ted|Ted]]<br /> rect 347 1335 366 1351 [[Element:Tv1|Tv1]]<br /> rect 347 1288 372 1304 [[Element:Tom|Tom]]<br /> rect 347 1319 371 1335 [[Element:17.6|17.6]]<br /> rect 347 1304 368 1320 [[Element:297|297]]<br /> rect 347 1273 379 1289 [[Element:Tor4a|Tor4a]]<br /> rect 347 1257 393 1273 [[Element:Micropia|Micropia]]<br /> rect 347 1241 399 1257 [[Element:Blastopia|Blastopia]]<br /> rect 347 1226 377 1242 [[Element:Mdg3|Mdg3]]<br /> rect 347 1195 414 1211 [[Element:B1147A04.5|B1147A04.5]]<br /> rect 347 1179 406 1195 [[Element:Grande1-4|Grande1-4]]<br /> rect 347 1210 383 1226 [[Element:RIRE2|RIRE2]]<br /> rect 347 1164 390 1180 [[Element:Cinful-1|Cinful-1]]<br /> rect 347 1148 403 1164 [[Element:RetroSor1|RetroSor1]]<br /> rect 347 1132 374 1148 [[Element:Ogre|Ogre]]<br /> rect 347 1117 382 1133 [[Element:Tat4-1|Tat4-1]]<br /> rect 347 1101 367 1117 [[Element:Tft2|Tft2]]<br /> rect 347 1086 385 1102 [[Element:Bagy-2|Bagy-2]]<br /> rect 347 1070 398 1086 [[Element:Diaspora|Diaspora]]<br /> rect 347 1055 395 1071 [[Element:Athila4-1|Athila4-1]]<br /> rect 347 1023 392 1039 [[Element:Calypso|Calypso]]<br /> rect 347 1039 402 1055 [[Element:Cyclops-2|Cyclops-2]]<br /> rect 347 1008 372 1024 [[Element:Tor1|Tor1]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the integrase protein (INT) product encoded by the pol internal region of the ''Ty3/Gypsy'' LTR retroelement family using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

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