https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3AORFC_Soymovirus 2026-06-09T16:16:11Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:ORFC_Soymovirus&diff=1195&oldid=prev 2010-04-22T09:30:06Z

<p></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:ORFC_soymovirus.png|center<br /> rect 108 82 148 98 [[Element:SbCMV|SbCMV]]<br /> rect 108 126 141 142 [[Element:BRRV|BRRV]]<br /> rect 107 167 161 183 [[Element:CmYLCV|CmYLCV]]<br /> rect 104 36 150 54 [[Element:RuFDV|RuFDV]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the protein product encoded by ORFC of three soymoviruses. It has been also included the ORFgp3 of RuFDV (''Caulimovirus'' genus) because its sequence reveals significant similarities with ''Soymovirus'' ORFC. The tree has been performed using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

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