https://gydb.org/index.php?action=history&feed=atom&title=Phylogeny%3ARNaseH_Ty1%2FCopia 2026-06-09T17:09:31Z Revision history for this page on the wiki MediaWiki 1.35.0 https://gydb.org/index.php?title=Phylogeny:RNaseH_Ty1/Copia&diff=792&oldid=prev 2010-08-20T08:52:30Z

<p></p> <p><b>New page</b></p><div>[[Category:Phylogeny]]<br /> {{Phylogeny<br /> |map=&lt;imagemap&gt;<br /> Image:RNase_ty1_copia.png|center<br /> rect 332 506 377 522 [[Element:CoDi6.6|CoDi6.6]]<br /> rect 332 486 366 502 [[Element:Zeco2|Zeco2]]<br /> rect 332 466 366 482 [[Element:Zeco1|Zeco1]]<br /> rect 332 447 364 463 [[Element:Olco1|Olco1]]<br /> rect 332 427 364 443 [[Element:Cico1|Cico1]]<br /> rect 332 348 360 364 [[Element:Tse1|Tse1]]<br /> rect 332 328 363 344 [[Element:Tkm1|Tkm1]]<br /> rect 332 308 351 324 [[Element:Ty4|Ty4]]<br /> rect 332 288 360 304 [[Element:Tdh2|Tdh2]]<br /> rect 332 269 358 285 [[Element:pCal|pCal]]<br /> rect 332 249 377 265 [[Element:CoDi5.5|CoDi5.5]]<br /> rect 332 229 377 245 [[Element:CoDi5.4|CoDi5.4]]<br /> rect 331 71 376 87 [[Element:CoDi4.5|CoDi4.5]]<br /> rect 331 31 376 47 [[Element:CoDi4.3|CoDi4.3]]<br /> rect 331 12 376 28 [[Element:CoDi4.4|CoDi4.4]]<br /> rect 331 51 376 67 [[Element:CoDi4.1|CoDi4.1]]<br /> rect 331 91 376 107 [[Element:CoDi3.1|CoDi3.1]]<br /> rect 331 110 376 126 [[Element:CoDi7.1|CoDi7.1]]<br /> rect 331 130 376 146 [[Element:CoDi2.4|CoDi2.4]]<br /> rect 331 170 376 186 [[Element:CoDi5.2|CoDi5.2]]<br /> rect 331 189 376 205 [[Element:CoDi5.3|CoDi5.3]]<br /> rect 331 150 376 166 [[Element:CoDi5.1|CoDi5.1]]<br /> rect 331 209 376 225 [[Element:CoDi5.6|CoDi5.6]]<br /> rect 332 369 359 385 [[Element:Ty1B|Ty1B]]<br /> rect 332 389 351 405 [[Element:Ty2|Ty2]]<br /> rect 332 782 382 798 [[Element:Hydra1-1|Hydra1-1]]<br /> rect 332 762 382 778 [[Element:Hydra1-2|Hydra1-2]]<br /> rect 332 409 373 425 [[Element:GalEa1|GalEa1]]<br /> rect 332 663 372 679 [[Element:Mtanga|Mtanga]]<br /> rect 332 742 376 758 [[Element:pCretro3|pCretro3]]<br /> rect 332 722 376 738 [[Element:pCretro6|pCretro6]]<br /> rect 332 703 380 719 [[Element:Xanthias|Xanthias]]<br /> rect 332 683 360 699 [[Element:1731|1731]]<br /> rect 332 604 377 620 [[Element:CoDi6.3|CoDi6.3]]<br /> rect 332 525 377 541 [[Element:CoDi6.1|CoDi6.1]]<br /> rect 332 584 377 600 [[Element:CoDi6.5|CoDi6.5]]<br /> rect 332 564 377 580 [[Element:CoDi6.4|CoDi6.4]]<br /> rect 332 623 377 639 [[Element:CoDi6.2|CoDi6.2]]<br /> rect 332 643 385 659 [[Element:PyRE1G1|PyRE1G1]]<br /> rect 332 544 377 560 [[Element:CoDi6.7|CoDi6.7]]<br /> rect 332 802 360 818 [[Element:Fourf|Fourf]]<br /> rect 332 822 376 838 [[Element:Tricopia|Tricopia]]<br /> rect 332 842 361 858 [[Element:Sto-4|Sto-4]]<br /> rect 332 862 363 878 [[Element:Tork4|Tork4]]<br /> rect 332 882 360 898 [[Element:Tnt-1|Tnt-1]]<br /> rect 332 901 353 917 [[Element:V12|V12]]<br /> rect 332 921 364 937 [[Element:RTvr2|RTvr2]]<br /> rect 330 1356 367 1372 [[Element:Opie-2|Opie-2]]<br /> rect 330 1336 376 1352 [[Element:SIRE1-4|SIRE1-4]]<br /> rect 330 1001 363 1017 [[Element:Copia|Copia]]<br /> rect 330 1317 389 1333 [[Element:Endovir1-1|Endovir1-1]]<br /> rect 330 1297 374 1313 [[Element:ToRTL1|ToRTL1]]<br /> rect 330 1277 359 1293 [[Element:TSI-9|TSI-9]]<br /> rect 330 962 354 978 [[Element:Tto1|Tto1]]<br /> rect 330 1021 358 1037 [[Element:Koco|Koco]]<br /> rect 330 942 365 958 [[Element:Batata|Batata]]<br /> rect 330 1041 383 1057 [[Element:Yokozuna|Yokozuna]]<br /> rect 330 981 382 997 [[Element:Humnum|Humnum]]<br /> rect 330 1060 377 1076 [[Element:Melmoth|Melmoth]]<br /> rect 330 1140 389 1156 [[Element:Hopscotch|Hopscotch]]<br /> rect 330 1238 379 1254 [[Element:Oryco1-1|Oryco1-1]]<br /> rect 330 1120 369 1136 [[Element:Retrofit|Retrofit]]<br /> rect 330 1100 362 1116 [[Element:Koala|Koala]]<br /> rect 330 1080 377 1096 [[Element:Vitico1-2|Vitico1-2]]<br /> rect 330 1258 358 1274 [[Element:Poco|Poco]]<br /> rect 330 1219 361 1235 [[Element:Araco|Araco]]<br /> rect 330 1159 364 1175 [[Element:Osser|Osser]]<br /> rect 330 1199 377 1215 [[Element:Vitico1-1|Vitico1-1]]<br /> rect 330 1179 379 1195 [[Element:Oryco1-2|Oryco1-2]]<br /> &lt;/imagemap&gt;<br /> |method=<br /> Phylogenetic reconstruction inferred based on the ''Ty1/Copia'' ribonuclease H protein (RNaseH) using MEGA 4.1 ([[Literature:100597|Kumar ''et al.'' 2008]]) and the Neighbor joining (NJ) method of phylogenetic reconstruction ([[Literature:65737|Saitou and Nei 1987]]) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.<br /> }}</div>

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