Equine Infectious Anemia Virus (EIAV) is a complex lentivirus that induces in horses a disease known as swamp fever or Equine Infectious Anemia (EIA). This disease was originally described in 1900 and is transmitted mechanically via the mouthparts of biting flies of the genus Stomoxys (horse flies and deer flies). Transmission is frequent in swampy regions during the summer. The infection results in acute symptoms in some animals, and chronic fevers, anemia, edema, and cachexia in others. Horses that survive the first clinical episodes are capable of controlling the viral replication and remain asymptomatic. However, all infected horses including those asymptomatic become carriers and are infectious for life (Center for Food Security and Public Health, College of Veterinary Medicine, Iowa State University (2003) and references therein). EIAV can be detected in infected leukocyte cultures at different infection stages, and can be distinguished from other lentiviruses by its triggering a dynamic and variable rapid disease development (Evans, Carpenter and Sevoian 1984).

The genomic structure of EIAV is 8.2 Kb including LTRs of 331 nt. The internal region of this retrovirus displays a Primer Binding Site (PBS) complementary to a tRNALys3, Open Reading Frames (ORFs) for gag, pol and env genes characteristic of retroviruses, tat and rev(both expanded in two exons), which are two accessory genes common in other lentiviruses, an orf S (orf 2) from which little is know, and adjacent to the 3´LTR the Polypurine Tract (PPT) common to other LTR retroelements (McGuire et al. 2000). As other non-primate lentiviruses, EIAV also displays between the RNase H and INT domains an ORF coding for a dUTPase similar to that observed in betaretroviruses, N-terminal to the PR domain ( Elder et al. 1992 ; Payne and Elder 2001 and references therein).



Figure not to scale. If present, long terminal repeats (LTRs) have been highlighted in blue. Amino acid motifs noted with lines indicate the conserved residues in each protein domain, abbreviations below mean:

MA=matrix PR=protease DU or DUT=dUTPase TM=transmembrane TAV or IBMP=transactivator/viroplasmin or inclusion body matrix protein
CA=capsid RT=reverse transcriptase INT=Integrase CHR=chromodomain
NC=nucleocapsid RH=RNaseH SU=surface MOV=movement protein
PPT=polypurine tract PBS=primer binding site ATF=aphid transmission factor VAP=virion associated protein

Related literature

Genbank accession: AF247394
Clade: Equine lentiviruses
Cluster or genus: Lentivirus
Branch or class: Class 2
Family: Retroviridae
System: LTR retroelements
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Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
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Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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